Resumé


2011


A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Consortium, R. M. Myers, J. Stamatoyannopoulos, M. Snyder, I. Dunham, R. C. Hardison, B. E. Bernstein, T. R. Gingeras, W. J. Kent, E. Birney, B. Wold and G. E. Crawford (2011)
PLoS Biol 9(4):e1001046
[view in PubMed]


Book review: Cap-analysis gene expression (Carninci,P)
Merkel, A. and R. Guigo (2011)
BioEssays 33(3): 233-234
[view in PubMed]


2008


Genome analysis of the platypus reveals unique signatures of evolution
Warren, W. C., L. W. Hillier, J. A. Marshall Graves, E. Birney, C. P. Ponting, F. Grutzner, K. Belov, W. Miller, L. Clarke, A. T. Chinwalla, S. P. Yang, A. Heger, D. P. Locke, P. Miethke, P. D. Waters, F. Veyrunes, L. Fulton, B. Fulton, T. Graves, J. Wallis, X. S. Puente, C. Lopez-Otin, G. R. Ordonez, E. E. Eichler, L. Chen, Z. Cheng, J. E. Deakin, A. Alsop, K. Thompson, P. Kirby, A. T. Papenfuss, M. J. Wakefield, T. Olender, D. Lancet, G. A. Huttley, A. F. Smit, A. Pask, P. Temple-Smith, M. A. Batzer, J. A. Walker, M. K. Konkel, R. S. Harris, C. M. Whittington, E. S. Wong, N. J. Gemmell, E. Buschiazzo, I. M. Vargas Jentzsch, A. Merkel, J. Schmitz, A. Zemann, G. Churakov, J. O. Kriegs, J. Brosius, E. P. Murchison, R. Sachidanandam, C. Smith, G. J. Hannon, E. Tsend-Ayush, D. McMillan, R. Attenborough, W. Rens, M. Ferguson-Smith, C. M. Lefevre, J. A. Sharp, K. R. Nicholas, D. A. Ray, M. Kube, R. Reinhardt, T. H. Pringle, J. Taylor, R. C. Jones, B. Nixon, J. L. Dacheux, H. Niwa, Y. Sekita, X. Huang, A. Stark, P. Kheradpour, M. Kellis, P. Flicek, Y. Chen, C. Webber, R. Hardison, J. Nelson, K. Hallsworth-Pepin, K. Delehaunty, C. Markovic, P. Minx, Y. Feng, C. Kremitzki, M. Mitreva, J. Glasscock, T. Wylie, P. Wohldmann, P. Thiru, M. N. Nhan, C. S. Pohl, S. M. Smith, S. Hou, M. Nefedov, P. J. de Jong, M. B. Renfree, E. R. Mardis and R. K. Wilson (2008)
Nature 453(7192): 175-83
[view in PubMed]


Evolution of microsatellite DNA.
Vargas Jentzsch, I., A. Bagshaw, E. Buschiazzo, A. Merkel and N. Gemmell (2008)
Handbook of Human Molecular Evolution.
D. Cooper and H. Kehrer-Sawatzki, Wiley. 2: 1744.


Detecting short tandem repeats from genome data: opening the software black box
Merkel, A. and N. Gemmell (2008)
Brief Bioinform 9(5): 355-66
[view in PubMed]


Detecting microsatellites in genome data: variance in definitions and bioinformatic approaches cause systematic bias
Merkel, A. and N. J. Gemmell (2008)
Evol Bioinform Online 4: 1-6
[view in PubMed]


Angelika Merkel

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